BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H08LP1|AL426286
(798 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1578 1551 0.0
>3x_Contig1578
Length = 13178
Score = 1551 bits (780), Expect = 0.0
Identities = 793/798 (99%), Gaps = 1/798 (0%)
Strand = Plus / Minus
Query: 1 gatcatgttacccctcagttgatgtgttttcattcatctagtgatattatcaatcaactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9972 gatcatgttacccctcagttgatgtgttttcattcatctagtgatattatcaatcaactg 9913
Query: 61 ccttttgcgtaggctcatctagtagatttgctgaggaagtatcatcatattcattaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9912 ccttttgcgtaggctcatctagtagatttgctgaggaagtatcatcatattcattaaaaa 9853
Query: 121 ttgtaccagcattctgaaatattaggtttgtttcttaccgtaagaagatgtaaaaaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9852 ttgtaccagcattctgaaatattaggtttgtttcttaccgtaagaagatgtaaaaaattg 9793
Query: 181 tgatacatttcttacttaattgtatatttattcaaaacggtaagggagccgttcgtcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9792 tgatacatttcttacttaattgtatatttattcaaaacggtaagggagccgttcgtcaga 9733
Query: 241 agcttaaaaaacattttcgttaccattaacatcttcaaaatttccaaacgtccaagccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9732 agcttaaaaaacattttcgttaccattaacatcttcaaaatttccaaacgtccaagccag 9673
Query: 301 atggcaagcttatttgcatcgatatagttgataatgggaaatgaaagacgttaacgtgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9672 atggcaagcttatttgcatcgatatagttgataatgggaaatgaaagacgttaacgtgaa 9613
Query: 361 acaaaccactcgatgtggttgtacaaatgggtatacaccatttataamataattattcca 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9612 acaaaccactcgatgtggttgtacaaatgggtatacaccatttataaaataattattcca 9553
Query: 421 ccaaaaaagtgacagttgtgttagagaaaagaatacaattacaagagaatgagttgaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9552 ccaaaaaagtgacagttgtgttagagaaaagaatacaattacaagagaatgagttgaata 9493
Query: 481 ttaccattttatagtagatcgtcatccgcctcgacgattgtvtttttcaccttcaagagt 540
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9492 ttaccattttatagtagatcgtcatccgcctcgacgattgtatttttcaccttcaagagt 9433
Query: 541 atagttgttttccaatggtctaacttattgaacctatcatattcgtagatcttttgcgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9432 atagttgttttccaatggtctaacttattgaacctatcatattcgtagatcttttgcgat 9373
Query: 601 aatttttcagtatcaccttcccttacagcttcaattacgtttgatagtsactcamactcc 660
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 9372 aatttttcagtatcaccttcccttacagcttcaattacgtttgatagtaactcaaactcc 9313
Query: 661 cttgattgagagaatgatggatccacacgattgtgattcgttcaaacttttatctgcagc 720
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 9312 cttgattgagagaatgatggatcca-acgattgtgattcgttcaaacttttatctgcagc 9254
Query: 721 tacaacatcaccagcagcaaggtaacataggccaatcttcaataagtactctttgagcga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9253 tacaacatcaccagcagcaaggtaacataggccaatcttcaataagtactctttgagcga 9194
Query: 781 ccactggcttaatttatt 798
||||||||||||||||||
Sbjct: 9193 ccactggcttaatttatt 9176
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6738
Number of Sequences: 1807
Number of extensions: 6738
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 798
length of database: 10,358,551
effective HSP length: 16
effective length of query: 782
effective length of database: 10,329,639
effective search space: 8077777698
effective search space used: 8077777698
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)